miRBase entry: oni-mir-17b-2

Stem-loop oni-mir-17b-2

Accession

MI0035572

Description

Oreochromis niloticus oni-mir-17b-2 precursor miRNA

Literature search

2 open access papers mention oni-mir-17b-2
(2 sentences)

Sequence

ugaaagugccuucacugcaguagaauugaacaaaacuACCUGCACUGUAAGCACUUUGGC
..(((((((...((.((((((((............))).))))).))...)))))))...

Structure

-ug       cuu  c     -   aauug 
   aaagugc   ca ugcag uag     a
   |||||||   || ||||| |||      
   UUUCACG   GU ACGUC Auc     a
CGG       AAU  C     C   aaaac

Annotation confidence Not enough data

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Genome context

GL831311.1: 1392622-1392681 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from oni-mir-17b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-17b

Accession	MIMAT0043499
Description	Oreochromis niloticus oni-miR-17b mature miRNA
Sequence	38 - ACCUGCACUGUAAGCACUUUGGC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774