Stem-loop mdm-MIR10981b

Accession

MI0035588

Description

Malus domestica mdm-MIR10981b precursor miRNA

Sequence

uggucaaagucagauuuggauccucuacugagcuuaaggagaggauucuucUGACCAACAUAUAUGGGCCGUuggaugaaaauucaacggcuauaauuauuauaauuuuaaaaugaucuccuguuuauaacuauugaauuuuuauccaacgguccauauauguugguuaggaggauccucuccguuagcucaggagaggauccaaauccgucaaagucg
........(.(.((((((((((((((.(((((((...((((((((((((((((((((((((((((((((((((((((((((((((((.((.(((((............................))))).)).))))))))))))))))))))))))))))))))))))))))))))))))))...))))))).)))))))))))))).).).......

Structure

uggucaaa u a              a       uaa                                                  c  c     uuauuauaauuuu 
        g c gauuuggauccucu cugagcu   ggagaggauucuucUGACCAACAUAUAUGGGCCGUuggaugaaaauucaa gg uauaa             a
        | | |||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||              
        c g cuaaaccuaggaga gacucga   ccucuccuaggaggauugguuguauauaccuggcaaccuauuuuuaaguu uc auauu             a
-gcugaaa u c              g       uug                                                  a  a     uguccucuaguaa 

Annotation confidence Not enough data

Genome context

MDC011018.554: 14886-15104 [+]

Mature mdm-miR10981b

• Accession: MIMAT0043533
• Description: Malus domestica mdm-miR10981b mature miRNA
• Sequence: 52 - UGACCAACAUAUAUGGGCCGU - 72
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812