Stem-loop mdm-MIR10983

Accession

MI0035601

Description

Malus domestica mdm-MIR10983 precursor miRNA

Sequence

gggccauugagaaggaucuccgggcagcagccucuuugcucaggcuucacugccaugacuguuuugcuuugguuaguuuccaucacuuugaaacuaacCAGAGCAAAACAGUCGUGGAAgugaagccugagcuaagaggccgcuacccggggauccaaaacugcaagu
.............(((((((((((.(((.(((((((.((((((((((((((.((((((((((((((((((((((((((((.........)))))))))))))))))))))))))))).)))))))))))))).))))))).))).)))))))))))............

Structure

gggccauugagaa           c   a       u              g                            cau 
             ggaucuccggg agc gccucuu gcucaggcuucacu ccaugacuguuuugcuuugguuaguuuc   c
             ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||   a
             ccuaggggccc ucg cggagaa cgaguccgaagugA GGUGCUGACAAAACGAGACcaaucaaag   c
-ugaacgucaaaa           a   c       u              A                            uuu 

Annotation confidence Not enough data

Genome context

MDC009740.183: 2169-2336 [+]

Mature mdm-miR10983

• Accession: MIMAT0043546
• Description: Malus domestica mdm-miR10983 mature miRNA
• Sequence: 99 - CAGAGCAAAACAGUCGUGGAA - 119
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812