Stem-loop mdm-MIR10991a

Accession

MI0035615

Description

Malus domestica mdm-MIR10991a precursor miRNA

Sequence

uuucuuuaggaaccggauccccuucggacccaaaugacuugaguccaaagaucaaaugaucCGAGCCAUUGAAAUUCGAUCCaacggcugcaauuuuuauaacuuuuagaggaccccuuguuuguagucguukgaucaaauuucaaugacucggaucauuugaugagugggcucaguuucuuuggaucccgaagggauccgguucccauuuuu
........(((((((((((((.((((((.(((((.((((.(((((((...(((((((((((((((.((((((((((.((((.(((((((((((...............((((...))))..))))))))))).)))).)))))))))).)))))))))))))))...)))))))))))..))))).).)))))))))))))))))).......

Structure

uuucuuua             c     - c     -u    u       aag               C          C    C           uuuuuauaacuuuua    a 
        ggaaccggauccc uucgg a ccaaa  gacu gagucca   aucaaaugaucCGAG CAUUGAAAUU GAUC aacggcugcaa               gagg  
        ||||||||||||| ||||| | |||||  |||| |||||||   ||||||||||||||| |||||||||| |||| |||||||||||               |||| c
        ccuuggccuaggg aagcc u gguuu  uuga cucgggu   uaguuuacuaggcuc guaacuuuaa cuag uugcugauguu               uucc  
-uuuuuac             -     c a     cu    -       gag               a          a    k           -------------ug    c 

Annotation confidence Not enough data

Genome context

MDC018744.152: 1811-2023 [+]

Mature mdm-miR10991a

• Accession: MIMAT0043561
• Description: Malus domestica mdm-miR10991a mature miRNA
• Sequence: 62 - CGAGCCAUUGAAAUUCGAUCC - 82
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812