Stem-loop mdm-MIR10991d

Accession

MI0035618

Description

Malus domestica mdm-MIR10991d precursor miRNA

Sequence

uuucuuuaggaaccggauccccuucggacccaaaugaacugaguccaaagaucaaaugauuCGAGCCAUUGAAAUUCGAUCCaacggcugcaauuuuuauaacuuuuagaggaccccuuguuuguagucguuggaucaaauuucaaugacucggaucauuugaugagugggcucaguuucuuuggaucccgaagggaucugguucccauuuuu
........(((((((((((((.((((((.(((((.((((((((((((...(((((((((((((((.((((((((((.((((((((((((((((...............((((...))))..)))))))))))))))).)))))))))).)))))))))))))))...)))))))))))).))))).).)))))))))))))))))).......

Structure

uuucuuua             c     - c     u            aag               C          C                uuuuuauaacuuuua    a 
        ggaaccggauccc uucgg a ccaaa gaacugagucca   aucaaaugauuCGAG CAUUGAAAUU GAUCCaacggcugcaa               gagg  
        ||||||||||||| ||||| | ||||| ||||||||||||   ||||||||||||||| |||||||||| ||||||||||||||||               |||| c
        ccuuggucuaggg aagcc u gguuu uuugacucgggu   uaguuuacuaggcuc guaacuuuaa cuagguugcugauguu               uucc  
-uuuuuac             -     c a     c            gag               a          a                -------------ug    c 

Annotation confidence Not enough data

Genome context

MDC007515.264: 1896-2108 [-]

Mature mdm-miR10991d

• Accession: MIMAT0043564
• Description: Malus domestica mdm-miR10991d mature miRNA
• Sequence: 62 - CGAGCCAUUGAAAUUCGAUCC - 82
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812