Stem-loop mdm-MIR10999a

Accession

MI0035644

Description

Malus domestica mdm-MIR10999a precursor miRNA

Sequence

auacacuauagGGGCGUGAUAUUCACACACCUcauuuuacauuuuacuuuucacacaacaagagcuguguaagaaguaaaaugggguguguggauaucacaccccuacacuaua
........((((((.((((((((((((((((((((((.......(((((((.(((((........))))).))))))))))))))))))))))))))))).)))))).......

Structure

auacacua      C                      uacauuu       c     aca 
        uagGGG GUGAUAUUCACACACCUcauuu       uacuuuu acaca   a
        |||||| ||||||||||||||||||||||       ||||||| |||||    
        aucccc cacuauaggugugugggguaaa       augaaga ugugu   g
-auaucac      a                      -------       a     cga 

Annotation confidence Not enough data

Genome context

MDC011592.254: 1365-1478 [+]

Mature mdm-miR10999a

• Accession: MIMAT0043591
• Description: Malus domestica mdm-miR10999a mature miRNA
• Sequence: 12 - GGGCGUGAUAUUCACACACCU - 32
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812