Stem-loop mdm-MIR11020

Accession

MI0035682

Description

Malus domestica mdm-MIR11020 precursor miRNA

Sequence

gcaagaucuuggguguaaccgucguaaugucccccccaacucucgaucgucaggugaugagaaagauagagggagggagaGACAUUACAACGGUUACACGGccaaaumuc
........((((((((((((((.((((((((((((((..((.((..(((((....)))))....)).))..)).))).).)))))))).))))))))))..)))).....

Structure

gcaagauc    --          c        - -   -  aa  c  --ga     a 
        uugg  guguaaccgu guaauguc c ccc cc  cu uc    ucguc g
        ||||  |||||||||| |||||||| | ||| ||  || ||    |||||  
        aacc  CACAUUGGCA CAUUACAG g ggg gg  ga ag    aguag g
---cumua    GG          A        a a   a  ga  u  aaag     u 

Annotation confidence Not enough data

Genome context

MDC019030.88: 1508-1617 [+]

Mature mdm-miR11020

• Accession: MIMAT0043631
• Description: Malus domestica mdm-miR11020 mature miRNA
• Sequence: 81 - GACAUUACAACGGUUACACGG - 101
• Evidence: experimental ; Illumina [1]

References

1. Identification of apple miRNAs and their potential role in fire blight resistance
   "Kaja E, Szczesniak MW, Jensen PJ, Axtell MJ, McNellis T, Makalowska I"
   Tree Genet Genomes. (2014) 11:812