miRBase entry: seu-MIR11022

Stem-loop seu-MIR11022


Accession
MI0035685
Description
Salicornia europaea seu-MIR11022 precursor miRNA


Sequence

ucgaggcucuagugcuucacccucacuagcuacggccuacgcguccuacugaacauaacaaaguaaccagaccuaaagggucuaaacccccccaagcuaggaaaaaagcaucgucaCGAGGCUGUGGGUGGAGAGGUcuagaucucg
.(((((.(((((........((((.(((.(((((((((.((.(.(.((((...........))))...((((((...))))))............(((........)))...).).))))))))))).))).)))).))))))))))

Structure
u     c     ugcuucac    a   g         a  c u ------cuacugaacauaacaaaguaacc      a 
 cgagg ucuag        ccuc cua cuacggccu cg g c                             agaccu  
 ||||| |||||        |||| ||| ||||||||| || | |                             |||||| a
 gcucu agauc        GGAG GGU GGUGUCGGA GC c g                             ucuggg  
-     -     -------U    A   G         -  a u cuacgaaaaaaggaucgaacccccccaaa      a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature seu-miR11022

Accession MIMAT0043634
Description Salicornia europaea seu-miR11022 mature miRNA
Sequence 117 - CGAGGCUGUGGGUGGAGAGGU - 137
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25848810
    High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
    Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
    BMC Plant Biol (2015) 15:63