miRBase entry: seu-MIR11030a

Stem-loop seu-MIR11030a


Accession
MI0035693
Description
Salicornia europaea seu-MIR11030a precursor miRNA


Sequence

agcacuuccuAAAUUGAUUUUGGCACUCCUCaccuucucacaugaauaguaagggagaggaguaccaauaucaauuuuagaagugcc
.(((((((..((((((((.((((.(((((((.((((((.........)).))))..))))))).)))).))))))))..))))))).

Structure
a       cu        U    C       -a    -  cac 
 gcacuuc  AAAUUGAU UUGG ACUCCUC  ccuu cu   a
 |||||||  |||||||| |||| |||||||  |||| ||   u
 cgugaag  uuuaacua aacc ugaggag  ggaa ga   g
c       au        u    a       ag    u  uaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature seu-miR11030a

Accession MIMAT0043642
Description Salicornia europaea seu-miR11030a mature miRNA
Sequence 11 - AAAUUGAUUUUGGCACUCCUC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25848810
    High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
    Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
    BMC Plant Biol (2015) 15:63