miRBase entry: seu-MIR11033

Stem-loop seu-MIR11033


Accession
MI0035697
Description
Salicornia europaea seu-MIR11033 precursor miRNA


Sequence

uacccgugccCCGGUACCGGGGCCACGUCUGCcuaagcuauucaacgugcacagcccccuaugaaggcccagcacuggccccggugucggggugacacggccccggugccggggugggugc
(((((..(((((((((((((((((..(((.((....))........((((...(((.........)))...))))..((((((....)))))))))..)))))))))))))))))))))).

Structure
-     gu                 AC   ------------------------------------------------------U  c 
 uaccc  gccCCGGUACCGGGGCC  GUC                                                       GC u
 |||||  |||||||||||||||||  |||                                                       ||  
 guggg  uggggccguggccccgg  cag                                                       cg a
c     --                 ca   uggggcuguggccccggucacgacccggaaguaucccccgacacgugcaacuuau  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature seu-miR11033

Accession MIMAT0043646
Description Salicornia europaea seu-miR11033 mature miRNA
Sequence 11 - CCGGUACCGGGGCCACGUCUGC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25848810
    High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
    Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
    BMC Plant Biol (2015) 15:63