miRBase entry: seu-MIR11043

Stem-loop seu-MIR11043


Accession
MI0035708
Description
Salicornia europaea seu-MIR11043 precursor miRNA


Sequence

uuugaaauacuaccucuuguccuuauuaugcgcaacaaagggguuuauuuuugugaaggagaauauauuccuuugUUGCACAUAAUAAGGACGGUAguauuguauu
.....(((((((((....((((((((((((.(((((((((((((.(((((((......))))))).))))))))))))).))))))))))))))))))))).....

Structure
uuuga         ucuu            c             u       gu 
     aauacuacc    guccuuauuaug gcaacaaaggggu uauuuuu  g
     |||||||||    |||||||||||| ||||||||||||| |||||||   
     uuaugAUGG    CAGGAAUAAUAC CGUUguuuccuua auaagag  a
uuaug         ----            A             u       ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature seu-miR11043

Accession MIMAT0043657
Description Salicornia europaea seu-miR11043 mature miRNA
Sequence 76 - UUGCACAUAAUAAGGACGGUA - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25848810
    High-throughput deep sequencing reveals that microRNAs play important roles in salt tolerance of euhalophyte Salicornia europaea
    Feng J, Wang J, Fan P, Jia W, Nie L, Jiang P, Chen X, Lv S, Wan L, Chang S, Li S, Li Y
    BMC Plant Biol (2015) 15:63