Stem-loop gmo-mir-223b

Accession

MI0036012

Description

Gadus morhua gmo-mir-223b precursor miRNA

Sequence

gggguauuugacaaacugacacucugucuuuuaguguccaGCUCAGCUUGUCAAAUACACUA
.(((((((((((((.(((((((.(((.....))).))...).)))).))))))))))).)).

Structure

g  -           a    - ---  u   u 
 gg guauuugacaa cuga c   ac cug c
 || ||||||||||| |||| |   || ||| u
 UC CAUAAACUGUU GACU G   ug gau u
A  A           C    C acc  u   u 

Annotation confidence Not enough data

Genome context

CAEA01406001.1: 327-388 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-223b

Mature gmo-miR-223b-3p

• Accession: MIMAT0044065
• Description: Gadus morhua gmo-miR-223b-3p mature miRNA
• Sequence: 41 - GCUCAGCUUGUCAAAUACACUA - 62
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305