miRBase entry: gmo-mir-219-1

Stem-loop gmo-mir-219-1


Accession
MI0036052
Description
Gadus morhua gmo-mir-219-1 precursor miRNA


Sequence

UGUCCAAACGCAAUUCUUGuguuccugguggcagcaggaguugugacuggacaucugc
((((((..((((((((((((...((....))..))))))))))))..)))))).....

Structure
-----      AA            guu  u 
     UGUCCA  CGCAAUUCUUGu   cc g
     ||||||  ||||||||||||   ||  
     acaggu  guguugaggacg   gg g
cgucu      ca            -ac  u 


Annotation confidence Not enough data
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Genome context
HE570163.1: 19895-19952 [-]

Database links

Mature gmo-miR-219-5p

Accession MIMAT0044115
Description Gadus morhua gmo-miR-219-5p mature miRNA
Sequence 1 - UGUCCAAACGCAAUUCUUG - 19
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305