miRBase entry: gmo-mir-11184a

Stem-loop gmo-mir-11184a


Accession
MI0036091
Description
Gadus morhua gmo-mir-11184a precursor miRNA


Sequence

uaccuuguggugcaugcacuguguaaauaugaacacagagcaugUACCAUAUUGUGCAUGCU
(((..((((((((((((.((((((........)))))).))))))))))))..)))......

Structure
------   cu            a      aaa 
      uac  uguggugcaugc cugugu   u
      |||  |||||||||||| ||||||    
      GUG  AUACCAUguacg gacaca   a
UCGUAC   UU            a      agu 


Annotation confidence Not enough data
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Genome context
HE571870.1: 112583-112644 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gmo-mir-11184a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gmo-miR-11184a-3p

Accession MIMAT0044171
Description Gadus morhua gmo-miR-11184a-3p mature miRNA
Sequence 45 - UACCAUAUUGUGCAUGCU - 62
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305