miRBase entry: gmo-mir-430e-3

Stem-loop gmo-mir-430e-3

Accession

MI0036110

Description

Gadus morhua gmo-mir-430e-3 precursor miRNA

Literature search

2 open access papers mention gmo-mir-430e-3
(8 sentences)

Sequence

ACCUGAAAUAGAGGCAUUGGUGgugauuugauuccuuaagugcaucucuuugggguug
((((.(((.(((.(((((...((..........))...))))).))).))).))))..

Structure

--    G   U   G     GGU  ugau 
  ACCU AAA AGA GCAUU   Gg    u
  |||| ||| ||| |||||   ||     
  uggg uuu ucu cguga   cc    u
gu    g   c   a     auu  uuag

Annotation confidence Not enough data

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Genome context

HE566748.1: 631-688 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from gmo-mir-430e-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gmo-miR-430e-5p

Accession	MIMAT0044061
Description	Gadus morhua gmo-miR-430e-5p mature miRNA
Sequence	1 - ACCUGAAAUAGAGGCAUUGGUG - 22
Evidence	experimental SOLiD [1]

References

PubMed ID: 25881242
Temperature during early development has long-term effects on microRNA expression in Atlantic cod
Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
BMC Genomics (2015) 16:305