Stem-loop gmo-mir-216b

Accession

MI0036225

Description

Gadus morhua gmo-mir-216b precursor miRNA

Sequence

UAAUCUCUGCAGGCAACUGUGAugguguguuuauaaaucucacaaucaccuggagagauu
.(((((((.((((....(((((.(((..........))))))))....)))).)))))))

Structure

U       G    CAAC     u   gugu 
 AAUCUCU CAGG    UGUGA ggu    u
 ||||||| ||||    ||||| |||     
 uuagaga gucc    acacu cua    u
-       g    acua     -   aaua 

Annotation confidence Not enough data

Genome context

HE567337.1: 799-858 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-216b

Mature gmo-miR-216b-5p

• Accession: MIMAT0044331
• Description: Gadus morhua gmo-miR-216b-5p mature miRNA
• Sequence: 1 - UAAUCUCUGCAGGCAACUGUGA - 22
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305