miRBase entry: gmo-mir-11194

Stem-loop gmo-mir-11194


Accession
MI0036244
Description
Gadus morhua gmo-mir-11194 precursor miRNA


Sequence

GGCAACAAUCCCAUUCUUCUCcuugucgcgguucaguauacuucacauugauguggacgcggaagaaccaggaacgucgga
(((.....(((..(((((((...((((.((..(((((.........)))))..)))))).)))))))...)))..)))...

Structure
---   AACAA   -CA       Ccu    g  gu     aua 
   GGC     UCC   UUCUUCU   uguc cg  ucagu   c
   |||     |||   |||||||   |||| ||  |||||   u
   cug     agg   aagaagg   gcag gu  aguua   u
agg   ---ca   acc       --c    -  gu     cac 


Annotation confidence Not enough data
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Genome context
CAEA01213306.1: 184-264 [+]

Database links

Mature gmo-miR-11194-5p

Accession MIMAT0044355
Description Gadus morhua gmo-miR-11194-5p mature miRNA
Sequence 1 - GGCAACAAUCCCAUUCUUCUC - 21
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305