miRBase entry: gmo-mir-11233

Stem-loop gmo-mir-11233


Accession
MI0036288
Description
Gadus morhua gmo-mir-11233 precursor miRNA


Sequence

acagcgauggucagcugugggaaugguacgucccAGGGCUGGAGAUGUCGCUGGGGA
.(((((((..((((((.(((((........))))).))))))....)))))))....

Structure
---a       --gg      g     aug 
    cagcgau    ucagcu uggga   g
    |||||||    |||||| |||||    
    GUCGCUG    GGUCGG Acccu   u
AGGG       UAGA      G     gca 


Annotation confidence Not enough data
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Genome context
HE571868.1: 244074-244130 [+]

Database links

Mature gmo-miR-11233-3p

Accession MIMAT0044404
Description Gadus morhua gmo-miR-11233-3p mature miRNA
Sequence 35 - AGGGCUGGAGAUGUCGCUGGGGA - 57
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305