miRBase entry: gmo-mir-11234

Stem-loop gmo-mir-11234


Accession
MI0036289
Description
Gadus morhua gmo-mir-11234 precursor miRNA


Sequence

cagagguucuaccacaaaagcuguugucuauugauucagauGUUAUGGAGAGCCUCUGUU
((((((((((.(((.((...(((..(((....))).)))...)).)))))))))))))..

Structure
--          a   c  aag   uu   u 
  cagagguucu cca aa   cug  guc a
  |||||||||| ||| ||   |||  |||  
  GUCUCCGAGA GGU UU   gac  uag u
UU          -   A  Gua   -u   u 


Annotation confidence Not enough data
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Genome context
HE567998.1: 910257-910316 [+]

Database links

Mature gmo-miR-11234-3p

Accession MIMAT0044405
Description Gadus morhua gmo-miR-11234-3p mature miRNA
Sequence 42 - GUUAUGGAGAGCCUCUGUU - 60
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305