Stem-loop gmo-mir-11243

Accession

MI0036301

Description

Gadus morhua gmo-mir-11243 precursor miRNA

Sequence

gcuggggaagaacucccuaaggucaaugauguaaacacgggaCCAGGGAGCCCGUCUCAGCGU
(((((((..(..((((((..((((..((.((....)))).))))))))))..).)))))))..

Structure

--       aa aa      aa    aa  a  u 
  gcugggg  g  cucccu  gguc  ug ug a
  |||||||  |  ||||||  ||||  || ||  
  CGACUCU  C  GAGGGA  CCag  gc ac a
UG       -G CC      --    -g  -  a 

Annotation confidence Not enough data

Genome context

HE570148.1: 104076-104138 [+]

Mature gmo-miR-11243-3p

• Accession: MIMAT0044420
• Description: Gadus morhua gmo-miR-11243-3p mature miRNA
• Sequence: 43 - CCAGGGAGCCCGUCUCAGCGU - 63
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305