Stem-loop gmo-mir-11252

Accession

MI0036311

Description

Gadus morhua gmo-mir-11252 precursor miRNA

Sequence

AUCGUUUCGAGCCGCUCUAGUuacaugugaugCUAGAGGGUAACGAAACGACA
.((((((((.(((.(((((((..........))))))))))..))))))))..

Structure

-A        -A   G       uaca 
  UCGUUUCG  GCC CUCUAGU    u
  ||||||||  ||| |||||||     
  AGCAAAGC  UGG GAGAUCg    g
AC        AA   -       uagu 

Annotation confidence Not enough data

Genome context

HE569118.1: 63533-63585 [-]

Mature gmo-miR-11252-5p

• Accession: MIMAT0044430
• Description: Gadus morhua gmo-miR-11252-5p mature miRNA
• Sequence: 1 - AUCGUUUCGAGCCGCUCUAGU - 21
• Evidence: experimental ; SOLiD [1]

Mature gmo-miR-11252-3p

• Accession: MIMAT0044431
• Description: Gadus morhua gmo-miR-11252-3p mature miRNA
• Sequence: 33 - CUAGAGGGUAACGAAACGACA - 53
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305