miRBase entry: gmo-mir-11258

Stem-loop gmo-mir-11258


Accession
MI0036318
Description
Gadus morhua gmo-mir-11258 precursor miRNA


Sequence

AACACAAUUUGGAUGAAACAGGugaaaaauuuuguacugugucggacauacuguguugg
((((((...((..(((.((((...............)))).)))..))...))))))..

Structure
--      AUU  GA   A    Gugaaa 
  AACACA   UG  UGA ACAG      a
  ||||||   ||  ||| ||||      a
  uugugu   ac  gcu uguc      u
gg      cau  ag   g    auguuu 


Annotation confidence Not enough data
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Genome context
HE566990.1: 31707-31765 [+]

Database links

Mature gmo-miR-11258-5p

Accession MIMAT0044438
Description Gadus morhua gmo-miR-11258-5p mature miRNA
Sequence 1 - AACACAAUUUGGAUGAAACAGG - 22
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305