miRBase entry: gmo-mir-11266a

Stem-loop gmo-mir-11266a


Accession
MI0036326
Description
Gadus morhua gmo-mir-11266a precursor miRNA


Sequence

UGGAUUGAGCAGUCGUUGCUUCGGUcgccgccguggauugagcagucguugcuucagc
....((((((((.(((((((.(((((.........)))))))))).)))))).)))).

Structure
UGGA    -    U  -     U     gcc 
    UUGA GCAG CG UUGCU CGGUc   g
    |||| |||| || ||||| |||||   c
    gacu cguu gc gacga guuag   c
---c    u    -  u     -     gug 


Annotation confidence Not enough data
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Genome context
HE566619.1: 224238-224295 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gmo-mir-11266a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gmo-miR-11266a-5p

Accession MIMAT0044449
Description Gadus morhua gmo-miR-11266a-5p mature miRNA
Sequence 1 - UGGAUUGAGCAGUCGUUGCUUCGGU - 25
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305