miRBase entry: gmo-mir-11266b

Stem-loop gmo-mir-11266b

Accession

MI0036327

Description

Gadus morhua gmo-mir-11266b precursor miRNA

Sequence

ucguugcuucggucggugaagucgccgccgUGGAUUGAGCAGUCGUUGCUUCGGU
.(((((((((((.(((((....))))))))......)))))).))..........

Structure

---------u  -      ------   u     a 
          cg uugcuu      cgg cggug a
          || ||||||      ||| |||||  
          GC GACGAG      gcc gccgc g
UGGCUUCGUU  U      UUAGGU   -     u

Annotation confidence Not enough data

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Genome context

HE566619.1: 224358-224412 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-11266b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature gmo-miR-11266b-3p

Accession	MIMAT0044450
Description	Gadus morhua gmo-miR-11266b-3p mature miRNA
Sequence	31 - UGGAUUGAGCAGUCGUUGCUUCGGU - 55
Evidence	experimental SOLiD [1]

References

PubMed ID: 25881242
Temperature during early development has long-term effects on microRNA expression in Atlantic cod
Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
BMC Genomics (2015) 16:305