miRBase entry: gmo-mir-11271

Stem-loop gmo-mir-11271


Accession
MI0036332
Description
Gadus morhua gmo-mir-11271 precursor miRNA


Sequence

AACAAUUUUCGAUCUCUGUGUauacagaucuucuuacacacaugucgaaacuugau
..(((.(((((((...((((((............))))))...))))))).)))..

Structure
AA   U       CUC      uacag 
  CAA UUUCGAU   UGUGUa     a
  ||| |||||||   ||||||      
  guu aaagcug   acacau     u
ua   c       uac      ucuuc 


Annotation confidence Not enough data
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Genome context
HE571170.1: 1686698-1686753 [+]

Database links

Mature gmo-miR-11271-5p

Accession MIMAT0044456
Description Gadus morhua gmo-miR-11271-5p mature miRNA
Sequence 1 - AACAAUUUUCGAUCUCUGUGU - 21
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 25881242
    Temperature during early development has long-term effects on microRNA expression in Atlantic cod
    Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
    BMC Genomics (2015) 16:305