Stem-loop gmo-mir-11282

Accession

MI0036344

Description

Gadus morhua gmo-mir-11282 precursor miRNA

Sequence

UACCUAUUGAUCACUUGGCUGUUUCcuucgaaucacccgcuaggggacgucaagugggucaaguggg
..((..(((((((((((((.(((((((.((.......))..)))))))))))))).))))))..)).

Structure

UA  UA      -       U       -u  aa 
  CC  UUGAUC ACUUGGC GUUUCcu  cg  u
  ||  |||||| ||||||| |||||||  ||  c
  gg  aacugg ugaacug cagggga  gc  a
-g  ug      g       -       uc  cc 

Annotation confidence Not enough data

Genome context

HE569559.1: 61218-61284 [+]

Mature gmo-miR-11282-5p

• Accession: MIMAT0044470
• Description: Gadus morhua gmo-miR-11282-5p mature miRNA
• Sequence: 1 - UACCUAUUGAUCACUUGGCUGUUUC - 25
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 25881242
   Temperature during early development has long-term effects on microRNA expression in Atlantic cod
   Bizuayehu TT, Johansen SD, Puvanendran V, Toften H, Babiak I
   BMC Genomics (2015) 16:305