Stem-loop fve-MIR156f

Accession

MI0036355

Description

Fragaria vesca fve-MIR156f precursor miRNA

Sequence

uacgagcuuucauacuuuuggucugauucuaaagaggauucauggugcagggaggauauggauauaugacugaucuaaugaucuauggaugguuaugaggaauuaugUUGACAGAAGAUAGAGAGCACaac
.....((((((((.((((((.(((((((((..(....((((((((..((....((((..(.........)..))))..))..)))))))).....)..)))))))....)))))))))).)))))).....

Structure

uacga      -  a      g  ----       aa -gagg        ug  ggga    au gau 
     gcuuuc au cuuuug uc    ugauucu  a     auucaugg  ca    ggau  g   a
     |||||| || |||||| ||    |||||||  |     ||||||||  ||    ||||  |   u
     CGAGAG UA GAAGAC AG    auuaagg  u     uagguauc  gu    ucua  c   a
caaCA      A  -      -  UUgu       ag auugg        ua  --aa    gu agu 

Annotation confidence Not enough data

Genome context

LG3: 29884562-29884692 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fve-MIR156f

Mature fve-miR156f

• Accession: MIMAT0044481
• Description: Fragaria vesca fve-miR156f mature miRNA
• Sequence: 108 - UUGACAGAAGAUAGAGAGCAC - 128
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610