Stem-loop fve-MIR159a

Accession

MI0036360

Description

Fragaria vesca fve-MIR159a precursor miRNA

Sequence

agcuaggguuauggagugGAGCUCCUUGAAGUCCAAUAGaagauguugcuagguugauugagcugcugagcuaugaauuccacacuucuaucucuguuuuuugauaaagaugauaggcuuguggcuugcauaccucaggagcugcauuaccugaguugcaucauguUUUGGAUUGAAGGGAGCUCUAcaccuuggcu
(((((((((......((((((((((((..(((((((.(.(.(((((.(((((((.(((..((((.(((((.((((....(((((..(((((((((............))).))))))..)))))....)))).))))).))))..))))))).))).))))).).).)))))))..)))))))))))))))))))))

Structure

         uaugga            GA       U G a     u   -    u   ug    g     c    aauu     cu      -   guuuu 
agcuagggu      gugGAGCUCCUU  AGUCCAA A a gaugu gcu aggu gau  agcu cugag uaug    ccaca  ucuauc ucu     u
|||||||||      ||||||||||||  ||||||| | | ||||| ||| |||| |||  |||| ||||| ||||    |||||  |||||| |||      
ucgguucca      cAUCUCGAGGGA  UUAGGUU u u cuacg uga ucca uua  ucga gacuc auac    ggugu  ggauag aga     u
         ------            AG       U g a     u   g    -   cg    g     c    guuc     uc      u   aauag 

Annotation confidence Not enough data

Genome context

LG5: 10261604-10261800 [-]

Mature fve-miR159a-5p

• Accession: MIMAT0044487
• Description: Fragaria vesca fve-miR159a-5p mature miRNA
• Sequence: 19 - GAGCUCCUUGAAGUCCAAUAG - 39
• Evidence: experimental ; Illumina [1]

Mature fve-miR159a-3p

• Accession: MIMAT0044488
• Description: Fragaria vesca fve-miR159a-3p mature miRNA
• Sequence: 167 - UUUGGAUUGAAGGGAGCUCUA - 187
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610