Stem-loop fve-MIR159c

Accession

MI0036362

Description

Fragaria vesca fve-MIR159c precursor miRNA

Sequence

gagauacauguuaguugugaaaggagcuuccuucaauccaauugagagggcuagacagugguuugagcugucaaaucaugcacucggcucacccuuaaucgucauggaaaguaugaugcuaaggguuugccaguugcaugauaugagagcaacucugccgcugcuuguauuucccAUUGGAUUGAAGGGAGCUCCCucauuaacucaguguagcuu
(((.(((((...((((((((..((((((((((((((((((((.(.(((.((.((.(((((((..(((((.(((.((((((((((.(((..(((((((..(((((((.....))))))).)))))))..))))).)))))))).))).)))...)).))))))))).))..)))).)))))))))))))))))))).))).)))))..))))).)))

Structure

   a     guu     -   aa                    u a   -g  u  a       uu  ---   g   a        -  c   uc       au       g 
gag uacau   aguug uga  ggagcuuccuucaauccaau g gag  gc ag caguggu  ga   gcu uca aucaugca cu ggc  acccuua  cgucaug a
||| |||||   ||||| |||  |||||||||||||||||||| | |||  || || |||||||  ||   ||| ||| |||||||| || |||  |||||||  ||||||| a
uuc augug   ucaau acu  CCUCGAGGGAAGUUAGGUUA c cuu  ug uc gucgccg  cu   cga agu uaguacgu ga ccg  ugggaau  guaguau a
   g     -ac     u   -C                    c -   ua  u  -       -u  caa   g   a        u  -   uu       -c       g 

Annotation confidence Not enough data

Genome context

LG6: 2332525-2332740 [+]

Mature fve-miR159c

• Accession: MIMAT0044490
• Description: Fragaria vesca fve-miR159c mature miRNA
• Sequence: 176 - AUUGGAUUGAAGGGAGCUCCC - 196
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610