Stem-loop fve-MIR166b

Accession

MI0036371

Description

Fragaria vesca fve-MIR166b precursor miRNA

Sequence

augagucugaaacuguuguugaggggaaugcuggcugguucgagaccaauauuaguggucugcagcaagcgaagaacaugagcaccugaaugaugaucUCGGACCAGGCUUCAUUCCCCccaauacuaaacuuucauucau
(((((..(((((.((.(((((.((((((((..(.(((((((((((.((.((((.(((.(((((.....)))........)).)))...)))).)).))))))))))).)..)))))))).))))).))...))))))))))

Structure

     uc     --c  u     a        cu g           c  a    --a   g  --------   a 
augag  ugaaa   ug uguug ggggaaug  g cugguucgaga ca uauu   gug uc        ugc g
|||||  |||||   || ||||| ||||||||  | ||||||||||| || ||||   ||| ||        ||| c
uacuu  acuuu   au auaac CCCCUUAC  C GACCAGGCUcu gu guaa   cac ag        gcg a
     --     caa  c     c        UU G           a  a    guc   g  uacaagaa   a 

Annotation confidence Not enough data

Genome context

LG4: 2660780-2660920 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR166b

Mature fve-miR166b

• Accession: MIMAT0044501
• Description: Fragaria vesca fve-miR166b mature miRNA
• Sequence: 99 - UCGGACCAGGCUUCAUUCCCC - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610