miRBase entry: fve-MIR166d

Stem-loop fve-MIR166d


Accession
MI0036372
Description
Fragaria vesca fve-MIR166d precursor miRNA


Sequence

ucucccuaauaguugagGGGAAUGUCGUCUGGUUCGAaaucguucugugagcucaaguaugaucaucaggaugauuUCGGACCAGGCUUCAUUCCCCucaaacuaggaga
(((((....(((((((((((((((..((((((((((((((((((((((((.(........).))).)))))))))))))))))))))..)))))))))).))))))))))

Structure
     cuaa     -          UC                     -   g uca 
ucucc    uaguu gagGGGAAUG  GUCUGGUUCGAaaucguucug uga c   a
|||||    ||||| ||||||||||  ||||||||||||||||||||| ||| |    
agagg    aucaa cuCCCCUUAC  CGGACCAGGCUuuaguaggac acu g   g
     ----     a          UU                     u   a uau 


Annotation confidence Not enough data
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Genome context
LG2: 12452990-12453099 [-]

Database links

Mature fve-miR166d-5p

Accession MIMAT0044502
Description Fragaria vesca fve-miR166d-5p mature miRNA
Sequence 18 - GGGAAUGUCGUCUGGUUCGA - 37
Evidence experimental
Illumina [1]

Mature fve-miR166d-3p

Accession MIMAT0044503
Description Fragaria vesca fve-miR166d-3p mature miRNA
Sequence 77 - UCGGACCAGGCUUCAUUCCCC - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610