miRBase entry: fve-MIR166c

Stem-loop fve-MIR166c


Accession
MI0036373
Description
Fragaria vesca fve-MIR166c precursor miRNA


Sequence

uugcggggaauguugucuggcucgaggacccuuuuccgugaaagaucuauagucauauagaucaaucuuuuguauauauuguuuuagauaaauagaugaucaugacuuuuugguggaguuagugucgUCGGACCAGGCUUCAUUCCCCccaa
.((.((((((((..((((((.((((.(((.((.((((((.((((......((((((...(((((.((((((((.((........)).))))).)))))))))))))))))).))))))..)).))).)))).))))))..)))))))).)).

Structure
u  c        uu      c    g   c  -u      g    aucuau      aua     a   -     a  uau 
 ug ggggaaug  gucugg ucga gac cu  uuccgu aaag      agucau   gauca ucu uuugu ua   u
 || ||||||||  |||||| |||| ||| ||  |||||| ||||      ||||||   ||||| ||| ||||| ||    
 ac CCCCUUAC  CGGACC GGCU cug ga  gaggug uuuu      ucagua   cuagu aga aaaua au   g
a  c        UU      A    g   u  uu      g    ------      ---     -   u     g  uuu 


Annotation confidence Not enough data
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Genome context
LG7: 1205662-1205813 [-]

Database links

Mature fve-miR166c

Accession MIMAT0044504
Description Fragaria vesca fve-miR166c mature miRNA
Sequence 128 - UCGGACCAGGCUUCAUUCCCC - 148
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610