miRBase entry: fve-MIR167c

Stem-loop fve-MIR167c


Accession
MI0036377
Description
Fragaria vesca fve-MIR167c precursor miRNA


Sequence

agUGAAGCUGCCAGCAUGAUCUagcuuugguuaucauguagaucaaguucgaaucugcuaauaacccuagcuaggucaugcucugacagccucacu
(((((.(((((.((((((((((((((..((((((...(((((((......).))))))..))))))..))))))))))))))..).)))).)))))

Structure
     A    - -C              uu      cau      - aa 
agUGA GCUG C  AGCAUGAUCUagcu  gguuau   guagau c  g
||||| |||| |  ||||||||||||||  ||||||   |||||| |   
ucacu cgac g  ucguacuggaucga  ccaaua   cgucua g  u
     c    a uc              uc      -au      a cu 


Annotation confidence Not enough data
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Genome context
LG2: 14554218-14554313 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR167c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fve-miR167c

Accession MIMAT0044508
Description Fragaria vesca fve-miR167c mature miRNA
Sequence 3 - UGAAGCUGCCAGCAUGAUCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610