miRBase entry: fve-MIR167a

Stem-loop fve-MIR167a


Accession
MI0036378
Description
Fragaria vesca fve-MIR167a precursor miRNA


Sequence

ucguggaucacuugcaguUGAAGCUGCCAGCAUGAUCUaagcuucccucucggccgguuguauacgagucaaggaaagaucagaucauguggcaacuucaccuguugauggcuucacga
((((((((((...((((.(((((.(((((.((((((((...(((.(((...(((((........)).))).))).)))...))))))))))))).))))).))))...))).)))))))

Structure
       -   cuu    u     C     G        aag   c   cuc   -  guu 
ucgugga uca   gcag UGAAG UGCCA CAUGAUCU   cuu ccu   ggc cg   g
||||||| |||   |||| ||||| ||||| ||||||||   ||| |||   ||| ||    
agcacuu ggu   uguc acuuc acggu guacuaga   gaa gga   cug gc   u
       c   agu    c     a     -        cua   a   --a   a  aua 


Annotation confidence Not enough data
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Genome context
LG2: 14557555-14557673 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from fve-MIR167a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature fve-miR167a

Accession MIMAT0044509
Description Fragaria vesca fve-miR167a mature miRNA
Sequence 19 - UGAAGCUGCCAGCAUGAUCU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610