Stem-loop fve-MIR168

Accession

MI0036379

Description

Fragaria vesca fve-MIR168 precursor miRNA

Sequence

aguaguuacuggcgggucucuaauUCGCUUGGUGCAGGUCGGGAAcugcuucgguuuuagagagagagccagauggcugcgguuccagcggagcggguCCCGCCUUGCAUCAACUGAAUcggagaccgcggugaaaucu
.....((((((.(((.(((((.(((((.((((((((((.(((((.((((((((.(....(((....((((....))))....))).).)))))))).))))).)))))))))).))))).)))))))))))))).....

Structure

aguag      g   g     a     C          U     A        g uuua   agag    a 
     uuacug cgg ucucu auUCG UUGGUGCAGG CGGGA cugcuucg u    gag    agcc g
     |||||| ||| ||||| ||||| |||||||||| ||||| |||||||| |    |||    ||||  
     aguggc gcc agagg UAAGU AACUACGUUC GCCCu ggcgaggc a    cuu    ucgg a
ucuaa      -   -     c     C          C     g        g ---c   ggcg    u 

Annotation confidence Not enough data

Genome context

LG5: 13551511-13551649 [-]

Mature fve-miR168-5p

• Accession: MIMAT0044510
• Description: Fragaria vesca fve-miR168-5p mature miRNA
• Sequence: 25 - UCGCUUGGUGCAGGUCGGGAA - 45
• Evidence: experimental ; Illumina [1]

Mature fve-miR168-3p

• Accession: MIMAT0044511
• Description: Fragaria vesca fve-miR168-3p mature miRNA
• Sequence: 99 - CCCGCCUUGCAUCAACUGAAU - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610