Stem-loop fve-MIR169d

Accession

MI0036383

Description

Fragaria vesca fve-MIR169d precursor miRNA

Sequence

gaagguaaaaagagccauguuuggUAGCCAAGGAUGACUUGCCUaaacuaaaucauccacagcuugguuucuaguuagcugcugcuagcuagcuaggguuccaaguuuguuuggggagcucucuuaggcagguuguccuucgcuacucugacuggcucuuaucuuuc
(((((((...(((((((.(((.((((((.(((((((((((((((((......((.((((((((((((.(((((((((((((....)))))))))))))..))))).))))..)))))......))))))))))))))))).))))))..))))))))))))))))).

Structure

-       aaa       u   -u      C                 acuaaa  a   --    -     -u             c 
 gaaggua   agagcca guu  ggUAGC AAGGAUGACUUGCCUaa      uc ucc  acag cuugg  uucuaguuagcug u
 |||||||   ||||||| |||  |||||| |||||||||||||||||      || |||  |||| |||||  |||||||||||||  
 uuucuau   ucucggu cag  ucaucg uuccuguuggacggauu      ag ggg  uguu gaacc  gggaucgaucgau g
c       ---       -   uc      c                 cucucg  -   uu    u     uu             c 

Annotation confidence Not enough data

Genome context

LG5: 4289807-4289973 [-]

Mature fve-miR169d

• Accession: MIMAT0044515
• Description: Fragaria vesca fve-miR169d mature miRNA
• Sequence: 25 - UAGCCAAGGAUGACUUGCCU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610