miRBase entry: fve-MIR171e

Stem-loop fve-MIR171e


Accession
MI0036388
Description
Fragaria vesca fve-MIR171e precursor miRNA


Sequence

ggagucauuauauauucuugguguuggugcgguucaaccucaccauugugccgauuaauaaccggagcuugaugguuUGAUUGAGCCGUGCCAAUAUCaggaguaaggugucuuc
((((.((((...(((((((((((((((((((((((((.(..((((((((.(((.........))).))..))))))..).))))))))))))))))))))))))).)))).))))

Structure
    u    aua                         c uc      --  g   auu 
ggag cauu   uauucuugguguuggugcgguucaa c  accauu  gu ccg   a
|||| ||||   ||||||||||||||||||||||||| |  ||||||  || |||   a
cuuc gugg   augaggaCUAUAACCGUGCCGAGUU G  ugguag  cg ggc   u
    u    --a                         A Uu      uu  a   caa 


Annotation confidence Not enough data
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Genome context
LG5: 9935591-9935705 [+]

Database links

Mature fve-miR171e

Accession MIMAT0044520
Description Fragaria vesca fve-miR171e mature miRNA
Sequence 78 - UGAUUGAGCCGUGCCAAUAUC - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610