Stem-loop fve-MIR171b

Accession

MI0036392

Description

Fragaria vesca fve-MIR171b precursor miRNA

Sequence

agaagcagacauggugugauauugagucggcucaucaaucaaucccagucauauucguguucaaacugaugaucacguuaauaauaugauuucugagaCGAGCCGAACCAAUAUCACUCuuguauucuucu
(((((...(((.((.(((((((((..(((((((.((..(((.....(((((((((((((.(((......))).)))).....)))))))))..))))).)))))))..))))))))).)))))...)))))

Structure

     cag   u  u         ag       a  aa   auccc         -----    u   aa 
agaag   aca gg gugauauug  ucggcuc uc  uca     agucauauu     cgug uca  c
|||||   ||| || |||||||||  ||||||| ||  |||     |||||||||     |||| |||   
ucuuc   ugu uC CACUAUAAC  AGCCGAG ag  agu     uuaguauaa     gcac agu  u
     uua   -  U         CA       C  --   ---cu         uaauu    u   ag 

Annotation confidence Not enough data

Genome context

LG7: 20263051-20263181 [+]

Mature fve-miR171b

• Accession: MIMAT0044525
• Description: Fragaria vesca fve-miR171b mature miRNA
• Sequence: 99 - CGAGCCGAACCAAUAUCACUC - 119
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610