Stem-loop fve-MIR172c

Accession

MI0036395

Description

Fragaria vesca fve-MIR172c precursor miRNA

Sequence

agucaguucuugguggugcggcaucaucaagauucacauacuuuuaaccgaaagguucaugccauugaaguaaguacugAGAAUCUUGAUGAUGCUGCAUcagcuaguacaugacu
(((((((.((.(.((((((((((((((((((((((.(((((((.....(((..(((....))).)))....))))).)).)))))))))))))))))))))).).)).)).)))))

Structure

     -  u  u g                      a  -     uuaac   aa   u 
aguca gu cu g uggugcggcaucaucaagauuc ca uacuu     cga  ggu c
||||| || || | |||||||||||||||||||||| || |||||     |||  |||  
ucagu ca ga c acUACGUCGUAGUAGUUCUAAG gu augaa     guu  ccg a
     a  u  u g                      A  c     -ugaa   -a   u 

Annotation confidence Not enough data

Genome context

LG3: 23263564-23263679 [+]

Mature fve-miR172c

• Accession: MIMAT0044529
• Description: Fragaria vesca fve-miR172c mature miRNA
• Sequence: 80 - AGAAUCUUGAUGAUGCUGCAU - 100
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610