Stem-loop fve-MIR172a

Accession

MI0036396

Description

Fragaria vesca fve-MIR172a precursor miRNA

Sequence

aguuguuguuugcggcuguagcaucaugaagauucacacaugcaauugaugcaacucaaacucccucucugucugccauaguuguuugaaaguacugAGAAUCUUGAUGAUGCUGCAUcggcaauaaacgacu
(((((((..((((.(.(((((((((((.(((((((.((((.(((((((..(((((...............)).)))..))))))).)).......)).))))))).))))))))))).).))))..)))))))

Structure

       gu    g c           g       a  -------  u       au   -  ucaaac 
aguuguu  uugc g uguagcaucau aagauuc ca       ca gcaauug  gca ac      u
|||||||  |||| | ||||||||||| ||||||| ||       || |||||||  ||| ||      c
ucagcaa  aacg c ACGUCGUAGUA UUCUAAG gu       gu uguugau  cgu ug      c
       au    g U           G       A  caugaaa  u       ac   c  ucucuc 

Annotation confidence Not enough data

Genome context

LG2: 14050578-14050710 [+]

Mature fve-miR172a

• Accession: MIMAT0044530
• Description: Fragaria vesca fve-miR172a mature miRNA
• Sequence: 98 - AGAAUCUUGAUGAUGCUGCAU - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610