Stem-loop fve-MIR3627a

Accession

MI0036402

Description

Fragaria vesca fve-MIR3627a precursor miRNA

Sequence

aagagguuggaauccugUCGCAGGAGAGAUGGCACUACCuagcuuuacgcauacguaccgagauauauacguacgugguaaauauauauagaugagcuauugaugguguagcagcuagcuugugccauccuccugugacaguaaucccugcaacuucuu
(((((((((((...((((((((((((.((((((((...((((((((((((.(((((((............))))))).....(((..((((.....))))..))))))))).))))))...))))))))))))))))))))...)))....))))))))

Structure

        ----   auc            A        UAC      -      ---------------------------a       cgaga 
aagagguu    gga   cugUCGCAGGAG GAUGGCAC   Cuagcu uuacgc                            uacguac     u
||||||||    |||   |||||||||||| ||||||||   |||||| ||||||                            |||||||      
uucuucaa    ccu   gacaguguccuc cuaccgug   gaucga gaugug                            gugcaug     a
        cguc   aau            -        uuc      c      guaguuaucgaguagauauauauaaaug       cauau 

Annotation confidence Not enough data

Genome context

LG6: 1809426-1809584 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from fve-MIR3627a

Mature fve-miR3627a

• Accession: MIMAT0044537
• Description: Fragaria vesca fve-miR3627a mature miRNA
• Sequence: 18 - UCGCAGGAGAGAUGGCACUACC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610