Stem-loop fve-MIR3627b

Accession

MI0036403

Description

Fragaria vesca fve-MIR3627b precursor miRNA

Sequence

auccugUCGCAGGAGAGAUGGCACUACCuagcuuuacgcauacguaacgagauauauacguacgugguaaauauauauagaugaguuauugaugguguagcagcuagcuugugccauccuccugugac
.....((((((((((.((((((((...((((((((((((....(((((...(((((((..(((...)))..)))))))......))))).....)))))).))))))...))))))))))))))))))

Structure

auccu          A        UAC      -      -auac     ---gag       cg   g 
     gUCGCAGGAG GAUGGCAC   Cuagcu uuacgc     guaac      auauaua  uac  
     |||||||||| ||||||||   |||||| ||||||     |||||      |||||||  ||| u
     caguguccuc cuaccgug   gaucga gaugug     uauug      uauauau  aug  
-----          -        uuc      c      guagu     aguaga       aa   g 

Annotation confidence Not enough data

Genome context

LG6: 1813136-1813263 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR3627b

Mature fve-miR3627b

• Accession: MIMAT0044538
• Description: Fragaria vesca fve-miR3627b mature miRNA
• Sequence: 7 - UCGCAGGAGAGAUGGCACUACC - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610