Stem-loop fve-MIR396e

Accession

MI0036413

Description

Fragaria vesca fve-MIR396e precursor miRNA

Sequence

ccuugcucuugucaugcuuUUCCACAGGCUUUCUUGAACUcgcuuuucuucucucugugcagcuauagagauuacugaacuuuccccagaggcauauguacguauagaaguauauggaaguaguuuaagaaagucuguggaagaacauggcaagcaagg
(((((((..(((((((.(((((((((((((((((((((((.(((((.....((((((((....))))))))...(((.........))).....(((((((........))))))))))))))))))))))))))))))))))).))))))))))))))

Structure

       cu       c                       c     ----------------------------------------ucuuc        c 
ccuugcu  ugucaug uuUUCCACAGGCUUUCUUGAACU gcuuu                                             ucucugug a
|||||||  ||||||| ||||||||||||||||||||||| |||||                                             ||||||||  
ggaacga  acgguac agaaggugucugaaagaauuuga ugaag                                             agagauau g
       --       a                       -     guauaugaagauaugcauguauacggagaccccuuucaagucauu        c 

Annotation confidence Not enough data

Genome context

LG4: 20230624-20230782 [-]

Mature fve-miR396e

• Accession: MIMAT0044551
• Description: Fragaria vesca fve-miR396e mature miRNA
• Sequence: 20 - UUCCACAGGCUUUCUUGAACU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610