Stem-loop fve-MIR397

Accession

MI0036414

Description

Fragaria vesca fve-MIR397 precursor miRNA

Sequence

uucagaaugaagaaacgUCAUUGAGUGCAGCGUUGAUGaaguccuuaguuucguuuccgaguuccgaugaucuucauggaggcgagcuggaggcaauuucaucaacgcugcacccaauuauguuucuauuccuucugga
(((((((.((((((((((.((((.((((((((((((((((((((((((((.((((((((((.((....)).)))...))))))))))).))))..)))))))))))))))))).)))).))))))))..)).)))))))

Structure

       u  --        C    A                  --    -    u       ---   u  c 
uucagaa ga  agaaacgU AUUG GUGCAGCGUUGAUGaagu  ccuu aguu cguuucc   gag uc g
||||||| ||  |||||||| |||| ||||||||||||||||||  |||| |||| |||||||   ||| ||  
aggucuu cu  ucuuugua uaac cacgucgcaacuacuuua  ggag ucga gcggagg   uuc ag a
       c  ua        u    c                  ac    g    -       uac   u  u 

Annotation confidence Not enough data

Genome context

LG3: 2934926-2935064 [-]

Mature fve-miR397

• Accession: MIMAT0044552
• Description: Fragaria vesca fve-miR397 mature miRNA
• Sequence: 18 - UCAUUGAGUGCAGCGUUGAUG - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610