miRBase entry: fve-MIR399b

Stem-loop fve-MIR399b


Accession
MI0036416
Description
Fragaria vesca fve-MIR399b precursor miRNA


Sequence

gguagagaugaauaacaggguaauucucccuuggcagaaauguauuauggugcauuuacguaacuguuaaauggcacuguuuucAGCCAAAGGAGAAUUGCCCUGaaauucaaaacuacu
(((((...(((((..((((((((((((((.(((((.((((......(((((((((((((......).))))).))))))))))).))))).))))))))))))))..)))))...)))))

Structure
     aga     aa              c     a    uguauu       -     - gu 
gguag   ugaau  caggguaauucucc uuggc gaaa      auggugc auuua c  a
|||||   |||||  |||||||||||||| ||||| ||||      ||||||| ||||| |   
ucauc   acuua  GUCCCGUUAAGAGG AACCG cuuu      ugucacg uaaau g  a
     aaa     aa              A     A    ------       g     u uc 


Annotation confidence Not enough data
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Genome context
LG3: 5220240-5220359 [+]

Database links

Mature fve-miR399b

Accession MIMAT0044554
Description Fragaria vesca fve-miR399b mature miRNA
Sequence 85 - AGCCAAAGGAGAAUUGCCCUG - 105
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610