Stem-loop fve-MIR477a

Accession

MI0036418

Description

Fragaria vesca fve-MIR477a precursor miRNA

Sequence

aaggcauugguugaucACUCUCCCUCAAGGGCUUCUCgccaaggugaaguauuauauccuaggucguccccuucuuaauucuaagggagacuugggguacuuacacaagguuguggagccugcgagggggaaugaccaagcuucuugccuu
((((((..(.(((.(((.((((((((..(((((((.((((...(((((((((.....((((((((.((((..............)))))))))))))))))).)))..)).)).)))))))..)))))))).))).))).)....))))))

Structure

      --uu g   a   C        AA       U  -  aag   -      uauau        g    cuucuu 
aaggca    g uug ucA UCUCCCUC  GGGCUUC Cg cc   gug aaguau     ccuagguc uccc      a
||||||    | ||| ||| ||||||||  ||||||| || ||   ||| ||||||     |||||||| ||||       
uuccgu    c aac agu agggggag  uccgagg gu gg   cac uucaug     ggguucag aggg      a
      ucuu g   c   a        cg       u  u  -aa   a      -----        -    aaucuu 

Annotation confidence Not enough data

Genome context

LG5: 2676771-2676921 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR477a

Mature fve-miR477a

• Accession: MIMAT0044556
• Description: Fragaria vesca fve-miR477a mature miRNA
• Sequence: 17 - ACUCUCCCUCAAGGGCUUCUC - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610