miRBase entry: fve-MIR482a

Stem-loop fve-MIR482a


Accession
MI0036419
Description
Fragaria vesca fve-MIR482a precursor miRNA


Sequence

ugaggaaguuucugucaugggaaguuuggaaagaauugguuguuuguuuaugacaucaaacuUCUUUCCAAUUCCUCCCAUGCCagugguuucuca
(((((((.(..(((.(((((((.(.(((((((((((((((.(((.......))))))))..))))))))))..).))))))).))).).)))))))

Structure
       g uu   u       a -u          --     u   ug 
ugaggaa u  cug cauggga g  uuggaaagaa  uuggu guu  u
||||||| |  ||| ||||||| |  ||||||||||  ||||| |||  u
acucuuu g  gaC GUACCCU C  AACCUUUCUu  aacua cag  u
       g -u   C       C UU          ca     -   ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
LG4: 464027-464122 [-]

Database links

Mature fve-miR482a

Accession MIMAT0044557
Description Fragaria vesca fve-miR482a mature miRNA
Sequence 63 - UCUUUCCAAUUCCUCCCAUGCC - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610