miRBase entry: fve-MIR530

Stem-loop fve-MIR530


Accession
MI0036424
Description
Fragaria vesca fve-MIR530 precursor miRNA


Sequence

agccaaaggugguuucauuuaucUGCAUUUGCACCUGCACCUCUucgauccuagauuaaugguuucugccaaguacuacuggaaugcagaagaucaauaggugcagguguaagugcagacgaaugccuucuugguu
.(((((.((.((...(((((.(((((((((((((((((((((.((.(((((((......))).((((((..(((...))).....)))))))))))).))))))))))))))))))))).))))))).))))))).

Structure
a     a  u  uuu     a                     C  c    cuagauuaauggu      ---ca   a 
 gccaa gg gg   cauuu ucUGCAUUUGCACCUGCACCU Uu gauc             uucugc     agu  
 ||||| || ||   ||||| ||||||||||||||||||||| || ||||             ||||||     ||| c
 ugguu cu cc   guaag agacgugaauguggacgugga aa cuag             aagacg     uca  
u     -  u  ---     c                     u  -    -------------      uaagg   u 


Annotation confidence Not enough data
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Genome context
LG6: 9182132-9182267 [+]

Database links

Mature fve-miR530

Accession MIMAT0044562
Description Fragaria vesca fve-miR530 mature miRNA
Sequence 24 - UGCAUUUGCACCUGCACCUCU - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610