miRBase entry: fve-MIR535a

Stem-loop fve-MIR535a


Accession
MI0036425
Description
Fragaria vesca fve-MIR535a precursor miRNA


Sequence

ggggugagcuaugauuggacuuguuUGACGAUGAGAGAGAGCACGCuuguuagcauccaugaaacagucaugcguguuuacaggcgugcucccucucaucgucauacaaucgaucuaaucuugugcaccuu
.(((((.((...((((((((((((.((((((((((((.((((((((((((.(((((.(((((.....))))).))))).)))))))))))).)))))))))))).))))..).)))))))..)).))))).

Structure
g     a  uau       - --    u            A            u     c     a 
 gggug gc   gauugga c  uugu UGACGAUGAGAG GAGCACGCuugu agcau cauga a
 ||||| ||   ||||||| |  |||| |||||||||||| |||||||||||| ||||| ||||| c
 uccac ug   cuaaucu g  aaca acugcuacucuc cucgugcggaca uugug guacu a
u     g  -uu       a cu    u            c            u     c     g 


Annotation confidence Not enough data
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Genome context
LG2: 10572490-10572620 [+]

Database links

Mature fve-miR535a

Accession MIMAT0044563
Description Fragaria vesca fve-miR535a mature miRNA
Sequence 26 - UGACGAUGAGAGAGAGCACGC - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26143249
    Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
    "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
    "Plant Physiol (2015) 169:594-610