Stem-loop fve-MIR845

Accession

MI0036428

Description

Fragaria vesca fve-MIR845 precursor miRNA

Sequence

cgguuguggguugaacgguugguaucagagccguacugugcuggagucuacuucaauucagacuaaauuucagcguaAACCGGCUCUGAUACCAAUUGuggcuuacucacug
((((.(((((((..(((((((((((((((((((...(((((((((((((..........))))).....))))))))...))))))))))))))))))))))))))..))))

Structure

    -u       ga                   uac        -----     acuu 
cggu  guggguu  acgguugguaucagagccg   ugugcugg     agucu    c
||||  |||||||  |||||||||||||||||||   ||||||||     |||||     
guca  cauucgg  uGUUAACCAUAGUCUCGGC   augcgacu     ucaga    a
    cu       --                   CAA        uuaaa     cuua 

Annotation confidence Not enough data

Genome context

LG5: 1342707-1342818 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from fve-MIR845

Mature fve-miR845

• Accession: MIMAT0044566
• Description: Fragaria vesca fve-miR845 mature miRNA
• Sequence: 78 - AACCGGCUCUGAUACCAAUUG - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26143249
   Novel and Recently Evolved MicroRNA Clusters Regulate Expansive F-BOX Gene Networks through Phased Small Interfering RNAs in Wild Diploid Strawberry
   "Xia R, Ye S, Liu Z, Meyers BC, Liu Z"
   "Plant Physiol (2015) 169:594-610